Installation

Options for Installation

Dependencies + Pip

• Prerequisites on MacOS

  • brew install mpich

  • brew install hdf5

• Prerequisites on Linux

  • sudo apt-get mpich

  • sudo apt-get hdf5

• pip install -e .

• or python setup.py install

• sh compile_neuron.sh

Conda

to install conda:

conda env update --file env.yml --name base python=3.8.5
pip install -e .
sh compile_neuron.sh

or::

conda install –name myenv –file env.yml env.yml sh compile_neuron.sh