Index

B

benchmark_ea.python.core_neuron_L5_TTPC1 module benchmark_ea.python.hoc_evaluator_coreneuron module benchmark_ea.python.hoc_evaluator_neurogpu module benchmark_ea.python.hoc_evaluator_neuron module

benchmark_ea.python.optimize_parameters_genetic_alg module benchmark_ea.python.plotting.plot_benchmarking module benchmark_ea.python.utils module

C

check_ap_at_zero() (in module benchmark_ea.python.utils) check_for_first_merge() (in module benchmark_ea.python.plotting.plot_benchmarking)

convert_allen_data() (in module benchmark_ea.python.utils) create_cpu_optimizer() (in module benchmark_ea.python.optimize_parameters_genetic_alg)

E

evaluate_with_lists() (benchmark_ea.python.hoc_evaluator_coreneuron.hoc_evaluator method) (benchmark_ea.python.hoc_evaluator_neurogpu.hoc_evaluator method) (benchmark_ea.python.hoc_evaluator_neuron.hoc_evaluator method)

G

get_first_zero() (in module benchmark_ea.python.utils) get_parser() (in module benchmark_ea.python.optimize_parameters_genetic_alg)

getVolts() (benchmark_ea.python.hoc_evaluator_neurogpu.hoc_evaluator method) (in module benchmark_ea.python.utils)

H

hoc_evaluator (class in benchmark_ea.python.hoc_evaluator_coreneuron) (class in benchmark_ea.python.hoc_evaluator_neurogpu) (class in benchmark_ea.python.hoc_evaluator_neuron)

L

L5_TTPC1_CELL (class in benchmark_ea.python.core_neuron_L5_TTPC1)

M

main() (in module benchmark_ea.python.optimize_parameters_genetic_alg) map_par() (benchmark_ea.python.hoc_evaluator_coreneuron.hoc_evaluator method) (benchmark_ea.python.hoc_evaluator_neurogpu.hoc_evaluator method) module benchmark_ea.python.core_neuron_L5_TTPC1 benchmark_ea.python.hoc_evaluator_coreneuron benchmark_ea.python.hoc_evaluator_neurogpu benchmark_ea.python.hoc_evaluator_neuron benchmark_ea.python.optimize_parameters_genetic_alg benchmark_ea.python.plotting.plot_benchmarking benchmark_ea.python.utils

my_evaluate_invalid_fitness() (benchmark_ea.python.hoc_evaluator_coreneuron.hoc_evaluator method) (benchmark_ea.python.hoc_evaluator_neurogpu.hoc_evaluator method) my_record_stats() (in module benchmark_ea.python.optimize_parameters_genetic_alg) my_update() (in module benchmark_ea.python.optimize_parameters_genetic_alg)

O

old_top_SFs() (benchmark_ea.python.hoc_evaluator_neurogpu.hoc_evaluator method)

P

plot_CPUGPU_bottleneck() (in module benchmark_ea.python.plotting.plot_benchmarking)

R

run_model() (benchmark_ea.python.hoc_evaluator_neurogpu.hoc_evaluator method) (in module benchmark_ea.python.hoc_evaluator_coreneuron)

S

save_logs() (in module benchmark_ea.python.optimize_parameters_genetic_alg)

stim_swap() (in module benchmark_ea.python.utils)

T

top_SFs() (benchmark_ea.python.hoc_evaluator_neurogpu.hoc_evaluator method) (in module benchmark_ea.python.hoc_evaluator_neuron) (in module benchmark_ea.python.utils)

U

update_params() (benchmark_ea.python.core_neuron_L5_TTPC1.L5_TTPC1_CELL method)